STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCBPSyndecan binding protein. (297 aa)    
Predicted Functional Partners:
PDCD6IP
BRO1 domain-containing protein.
    
 0.841
CA4
Carbonic anhydrase 4; Belongs to the alpha-carbonic anhydrase family.
      
 0.802
ENSAPLP00000025388
BRO1 domain-containing protein.
    
 0.754
FAM110B
Family with sequence similarity 110 member B.
      
 0.611
UNC93B1
Uncharacterized protein.
      
 0.580
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.543
NFASC
Uncharacterized protein.
     
 0.518
ENSAPLP00000029866
Bravo_FIGEY domain-containing protein.
     
 0.518
IFT57
Intraflagellar transport 57.
    
 0.510
IFT80
Intraflagellar transport 80.
    
 0.506
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.