Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNC1Troponin C1, slow skeletal and cardiac type. (161 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.995
TNNI1
Troponin I1, slow skeletal type.
   
 0.982
TNNI2
Troponin I2, fast skeletal type.
   
 0.980
TNNT3
Troponin T3, fast skeletal type.
   
 0.964
TNNC2
Troponin C2, fast skeletal type.
  
 
0.960
MYL3
Myosin light chain 3.
  
0.871
MYL4
Uncharacterized protein.
  
0.849
MYH7B
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.808
MYL2
Myosin light chain 2.
   
 0.804
SMIM20
Small integral membrane protein 20.
   
 0.804
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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