Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SPATA7Spermatogenesis associated 7. (499 aa)    
Predicted Functional Partners:
RPGR
Retinitis pigmentosa GTPase regulator.
   
 
 0.640
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.556
ENSAPLP00000023272
SERPIN domain-containing protein; Belongs to the serpin family.
    
   0.553
SPATA17
Spermatogenesis associated 17.
      
 0.549
U3J6E3_ANAPP
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.548
LCA5
Lebercilin LCA5.
      
 0.544
CEP290
Centrosomal protein 290.
      
 0.544
TULP1
TUB like protein 1; Belongs to the TUB family.
      
 0.544
CYB5R4
Cytochrome b5 reductase 4.
   
   0.526
IQCB1
IQ motif containing B1.
      
 0.496
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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