STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKEF1Ankyrin repeat and EF-hand domain containing 1. (773 aa)    
Predicted Functional Partners:
PCMTD2
Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2.
      
 0.847
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.786
FICD
FIC domain containing.
      
 0.669
ZMYND8
Zinc finger MYND-type containing 8.
      
 0.668
SAXO2
Stabilizer of axonemal microtubules 2.
   
 
 0.631
EYA2
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.607
EFHC2
EF-hand domain containing 2.
   
   0.592
EFHC1
EF-hand domain containing 1.
   
   0.592
DNAI1
Dynein axonemal intermediate chain 1.
    
  0.591
WDR63
WD repeat domain 63.
    
  0.591
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.