STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDS5BPDS5 cohesin associated factor B. (1322 aa)    
Predicted Functional Partners:
PDS5A
PDS5 cohesin associated factor A.
  
0.997
SMC3
Structural maintenance of chromosomes protein.
   
 0.992
WAPL
WAPL cohesin release factor.
   
 0.992
SMC1B
Structural maintenance of chromosomes protein.
   
 0.971
NIPBL
Nipped-B protein.
   
 0.956
STAG2
Stromal antigen 2.
   
 0.926
RAD21
RAD21 cohesin complex component.
   
 0.918
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.918
U3J9X0_ANAPP
SCD domain-containing protein.
   
 0.888
ENSAPLP00000020261
SCD domain-containing protein.
   
 0.888
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.