STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSpermatogenesis associated serine rich 2 like. (508 aa)    
Predicted Functional Partners:
VPS35L
VPS35 endosomal protein sorting factor like.
      
 0.601
NRBP1
Nuclear receptor binding protein 1.
      
 0.586
GSKIP
GSK3B interacting protein.
      
 0.586
ENSAPLP00000027464
Uncharacterized protein.
      
 0.586
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
      
 0.558
MINDY4
MINDY lysine 48 deubiquitinase 4.
      
 0.542
UNC13B
Unc-13 homolog B.
      
 0.532
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.483
C2CD2
C2 calcium dependent domain containing 2.
      
 0.477
FAM135B
Family with sequence similarity 135 member B.
      
 0.477
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.