Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOP58NOP58 ribonucleoprotein. (421 aa)    
Predicted Functional Partners:
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.998
DKC1
DKCLD domain-containing protein.
  
 0.997
WDR43
WD repeat domain 43.
   
 0.994
WDR75
WD repeat domain 75.
   
 0.991
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.990
HEATR1
HEAT repeat containing 1.
   
 0.989
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.986
GAR1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
  
 0.985
DDX18
RNA helicase.
  
 
 0.984
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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