Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN11UBX domain protein 11. (422 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 
 0.918
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.894
RND3
Rho family GTPase 3.
    
 0.821
WASF1
WASP family member 1.
    
   0.821
ABI2
Abl interactor 2.
    
   0.793
RND1
Rho family GTPase 1.
    
 0.782
ABI1
Abl interactor 1.
    
   0.753
ANKRD27
Ankyrin repeat domain 27.
    
 0.745
UBXN10
UBX domain protein 10.
    
 
 0.737
RND2
Rho family GTPase 2.
    
 0.697
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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