LAMA3 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LAMA3

Uncharacterized protein. (1412 aa)

Predicted Functional Partners:

ITGB1

0.935

ENSAPLP00000027619

0.900

ITGA3

0.821

ITGB6

0.818

ITGA6

0.812

ITGB4

0.810

ITGA1

0.805

ITGB3

0.804

LAMB1

0.801

DAG1

0.794

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAG1	ENSAPLP00000027619	ENSAPLP00000021027	ENSAPLP00000027619	Dystroglycan 1.	Uncharacterized protein.	0.437
DAG1	LAMA3	ENSAPLP00000021027	ENSAPLP00000008273	Dystroglycan 1.	Uncharacterized protein.	0.794
DAG1	LAMB1	ENSAPLP00000021027	ENSAPLP00000010260	Dystroglycan 1.	Laminin subunit beta 1.	0.789
ENSAPLP00000027619	DAG1	ENSAPLP00000027619	ENSAPLP00000021027	Uncharacterized protein.	Dystroglycan 1.	0.437
ENSAPLP00000027619	ITGA3	ENSAPLP00000027619	ENSAPLP00000016964	Uncharacterized protein.	Uncharacterized protein.	0.512
ENSAPLP00000027619	ITGA6	ENSAPLP00000027619	ENSAPLP00000015539	Uncharacterized protein.	Integrin subunit alpha 6; Belongs to the integrin alpha chain family.	0.486
ENSAPLP00000027619	ITGB4	ENSAPLP00000027619	ENSAPLP00000011624	Uncharacterized protein.	Integrin beta.	0.481
ENSAPLP00000027619	LAMA3	ENSAPLP00000027619	ENSAPLP00000008273	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSAPLP00000027619	LAMB1	ENSAPLP00000027619	ENSAPLP00000010260	Uncharacterized protein.	Laminin subunit beta 1.	0.801
ITGA1	ITGA3	ENSAPLP00000013159	ENSAPLP00000016964	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.747
ITGA1	ITGA6	ENSAPLP00000013159	ENSAPLP00000015539	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Integrin subunit alpha 6; Belongs to the integrin alpha chain family.	0.727
ITGA1	ITGB1	ENSAPLP00000013159	ENSAPLP00000009107	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.974
ITGA1	ITGB3	ENSAPLP00000013159	ENSAPLP00000004048	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.922
ITGA1	ITGB4	ENSAPLP00000013159	ENSAPLP00000011624	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Integrin beta.	0.852
ITGA1	ITGB6	ENSAPLP00000013159	ENSAPLP00000006521	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.899
ITGA1	LAMA3	ENSAPLP00000013159	ENSAPLP00000008273	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.805
ITGA1	LAMB1	ENSAPLP00000013159	ENSAPLP00000010260	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	Laminin subunit beta 1.	0.806
ITGA3	ENSAPLP00000027619	ENSAPLP00000016964	ENSAPLP00000027619	Uncharacterized protein.	Uncharacterized protein.	0.512
ITGA3	ITGA1	ENSAPLP00000016964	ENSAPLP00000013159	Uncharacterized protein.	Integrin subunit alpha 1; Belongs to the integrin alpha chain family.	0.747
ITGA3	ITGA6	ENSAPLP00000016964	ENSAPLP00000015539	Uncharacterized protein.	Integrin subunit alpha 6; Belongs to the integrin alpha chain family.	0.801