STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP3RNA polymerase II associated protein 3. (670 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.982
WDR92
WD repeat domain 92.
   
 0.911
PFDN2
Prefoldin subunit 2.
    
 0.853
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.849
PDRG1
P53 and DNA damage regulated 1.
    
 0.846
ACTR5
Actin related protein 5; Belongs to the actin family.
   
 0.827
PIH1D2
PIH1_CS domain-containing protein.
   
 
 0.813
POLR2E
RNA polymerase II subunit E.
   
 0.810
URI1
URI1 prefoldin like chaperone.
    
 0.800
TMEM106C
Transmembrane protein 106C.
      
 0.749
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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