STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf49Chromosome 5 open reading frame 49. (146 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.971
FAM183A
Uncharacterized protein.
   
 
 0.949
C4orf47
Chromosome 4 open reading frame 47.
  
 
 0.940
C11orf1
Chromosome 11 open reading frame 1.
   
 
 0.928
IQUB
IQ motif and ubiquitin domain containing.
    
 
 0.894
U3HYG5_ANAPP
DUF4201 domain-containing protein.
    
 
 0.860
CFAP77
Cilia and flagella associated protein 77.
   
 
 0.845
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.832
U3I2X0_ANAPP
Uncharacterized protein.
    
 
 0.821
ARMC3
Armadillo repeat containing 3.
   
 
 0.809
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.