STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1SWT1 RNA endoribonuclease homolog. (881 aa)    
Predicted Functional Partners:
GTF2H5
General transcription factor IIH subunit 5.
      
 0.747
MED12L
Mediator complex subunit 12L.
      
 0.747
AGTRAP
Angiotensin II receptor associated protein.
      
 0.624
SMG5
SMG5 nonsense mediated mRNA decay factor.
    
 
 0.615
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.611
NFYB
Nuclear transcription factor Y subunit beta.
      
 0.611
PRSS23
Serine protease 23.
      
 0.611
ENSAPLP00000020998
NTF2 domain-containing protein.
   
  
 0.595
TRMT1L
tRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.557
IVNS1ABP
Influenza virus NS1A binding protein.
      
 0.495
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.