STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX1Peroxisomal biogenesis factor 1. (1253 aa)    
Predicted Functional Partners:
PEX6
Peroxisomal biogenesis factor 6; Belongs to the AAA ATPase family.
  
0.999
PEX26
Peroxisomal biogenesis factor 26.
    
 0.974
PEX13
Peroxisomal biogenesis factor 13.
    
 0.955
PEX14
Peroxisomal biogenesis factor 14.
    
 0.947
PEX10
Peroxisomal biogenesis factor 10.
   
 0.936
ENSAPLP00000021461
Uncharacterized protein.
    
 0.874
FAM185A
Family with sequence similarity 185 member A.
    
 0.870
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.860
PEX5
Peroxisomal biogenesis factor 5.
   
 0.859
ENSAPLP00000020216
Uncharacterized protein.
   
 0.859
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.