Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IM41_ANAPPUncharacterized protein. (93 aa)    
Predicted Functional Partners:
IFT57
Intraflagellar transport 57.
    
 0.984
IFT172
Intraflagellar transport 172.
    
 0.959
IFT88
Intraflagellar transport 88.
    
 0.952
TRAF3IP1
MIP-T3 domain-containing protein.
    
 0.950
ENSAPLP00000018520
MIP-T3 domain-containing protein.
    
 0.950
TTC30B
Uncharacterized protein.
    
 0.936
IFT74
Intraflagellar transport 74.
    
 0.930
IFT81
Intraflagellar transport 81.
   
 0.927
IFT140
Intraflagellar transport 140.
   
 0.927
IFT52
Intraflagellar transport 52.
    
 0.925
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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