STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHANK3SH3 and multiple ankyrin repeat domains 3. (1647 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
 0.954
DLGAP1
DLG associated protein 1.
   
 0.952
DLGAP2
DLG associated protein 2.
   
 0.947
DLGAP3
DLG associated protein 3.
   
 0.904
DLGAP4
DLG associated protein 4.
   
 0.870
HOMER3
WH1 domain-containing protein.
    
 0.843
DLGAP5
DLG associated protein 5.
   
 0.785
MDGA1
MAM domain containing glycosylphosphatidylinositol anchor 1.
   
 0.740
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.670
RAP1B
RAP1B, member of RAS oncogene family.
   
 0.666
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.