STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSNAXIP1Uncharacterized protein. (716 aa)    
Predicted Functional Partners:
CCDC39
Coiled-coil domain containing 39.
   
 
 0.660
EFHC1
EF-hand domain containing 1.
   
  
 0.628
CFAP65
Cilia and flagella associated protein 65.
   
  0.597
FANCM
FA complementation group M.
    
 0.585
DNAAF1
Dynein assembly factor 1, axonemal.
   
 
 0.582
ENSAPLP00000028245
Uncharacterized protein.
    
 0.556
TEKT3
Tektin 3.
   
    0.555
ARID4B
AT-rich interaction domain 4B.
    
 0.552
ARID4A
AT-rich interaction domain 4A.
    
 0.552
ANKEF1
Ankyrin repeat and EF-hand domain containing 1.
   
  0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.