STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IM71_ANAPPFAM83 domain-containing protein. (564 aa)    
Predicted Functional Partners:
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.619
GALNT6
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.596
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor.
      
 0.556
HMMR
Hyaluronan mediated motility receptor.
   
 
 0.517
ENC1
Ectodermal-neural cortex 1.
      
 0.457
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
 
 0.451
GNB3
G protein subunit beta 3.
      
 0.439
CYP4V2
Cytochrome P450 family 4 subfamily V member 2; Belongs to the cytochrome P450 family.
      
 0.435
PPP1R16B
Protein phosphatase 1 regulatory subunit 16B.
 
  
 
 0.418
TPX2
TPX2 microtubule nucleation factor.
   
  
 0.409
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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