Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor IIIC subunit 6. (218 aa)    
Predicted Functional Partners:
U3IEY2_ANAPP
Uncharacterized protein.
     
  0.886
GTF3C3
General transcription factor IIIC subunit 3.
     
  0.886
GTF3C4
General transcription factor IIIC subunit 4.
     
  0.826
GTF3C1
General transcription factor IIIC subunit 1.
     
  0.826
GTF3C5
General transcription factor IIIC subunit 5.
     
  0.784
ENSAPLP00000020086
TFIIB domain-containing protein.
     
  0.676
ENSAPLP00000020531
TFIIB-type domain-containing protein.
     
  0.676
BDP1
SANT domain-containing protein.
     
  0.665
ZNF512
Zinc finger protein 512.
     
  0.549
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
     
  0.479
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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