STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD1Myb/SANT DNA binding domain containing 1. (321 aa)    
Predicted Functional Partners:
SAP130
SAP130_C domain-containing protein.
      
 0.663
SNUPN
Snurportin 1.
      
 0.663
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.582
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.573
CNGA4
Cyclic nucleotide gated channel subunit alpha 4.
      
 0.562
SNX29
Sorting nexin 29.
      
 0.547
VWA8
Von Willebrand factor A domain containing 8.
      
 0.517
CDADC1
Cytidine and dCMP deaminase domain containing 1.
      
 0.483
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.483
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.