STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUDS3SDS3 homolog, SIN3A corepressor complex component. (337 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
   
 0.981
ARID4A
AT-rich interaction domain 4A.
   
 0.978
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.968
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.968
SAP18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
     
 0.954
SAP30
Sin3A associated protein 30.
   
 0.952
ING1
Inhibitor of growth protein.
    
 
 0.916
SIN3B
SIN3 transcription regulator family member B.
   
 0.902
SIN3A
SIN3 transcription regulator family member A.
   
 0.902
HDAC3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.846
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.