Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USH1CUSH1 protein network component harmonin. (635 aa)    
Predicted Functional Partners:
USH1G
USH1 protein network component sans.
   
 0.996
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.956
USH2A
Usherin.
    
 0.926
CDH23
Cadherin related 23.
   
 
 0.924
CDHR2
Cadherin related family member 2.
   
 
 0.885
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.862
SALL4
Spalt like transcription factor 4.
      
 0.860
ZNF536
Zinc finger protein 536.
    
 
 0.856
PCDH15
Protocadherin related 15.
   
 
 0.849
CLRN1
Clarin 1.
      
 0.849
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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