Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain containing 2. (493 aa)    
Predicted Functional Partners:
FAM118A
Family with sequence similarity 118 member A.
      
 0.846
RSBN1
Round spermatid basic protein 1.
      
 0.667
U3IP57_ANAPP
Uncharacterized protein.
      
 0.667
STAM2
Signal transducing adaptor molecule 2.
      
 0.667
SCAF4
SR-related CTD associated factor 4.
      
 0.665
DEK
DEK proto-oncogene.
      
 0.645
TRMT11
tRNA methyltransferase 11 homolog.
     
 0.628
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
      
 0.625
U3IKX2_ANAPP
Uncharacterized protein.
      
 0.600
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
      
 0.582
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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