STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISXIntestine specific homeobox. (308 aa)    
Predicted Functional Partners:
TFAP2C
Transcription factor AP-2 gamma.
      
 0.546
VGLL1
Vestigial like family member 1.
      
 0.540
ZNF423
Zinc finger protein 423.
   
 0.517
ZIC2
Zic family member 2.
   
 0.503
CITED4
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4.
      
 0.501
STOX1
Storkhead box 1.
      
 0.500
GATA2
Uncharacterized protein.
    
 0.472
SIX3
SIX homeobox 3.
      
 0.427
GRHL3
Grainyhead like transcription factor 3.
    
 
 0.417
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.