STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP20Ubiquitin carboxyl-terminal hydrolase. (889 aa)    
Predicted Functional Partners:
C9orf78
Chromosome 9 open reading frame 78.
    
 
 0.752
WSB1
WD repeat and SOCS box containing 1.
    
 
 0.660
USP28
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
    
 0.650
CCP110
Centriolar coiled-coil protein 110.
    
 0.642
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.621
TOR1B
Torsin family 1 member B.
      
 0.620
CUL5
Cullin 5; Belongs to the cullin family.
   
  
 0.612
LAP3
Leucine aminopeptidase 3.
    
 0.598
YARS1
Tyrosine--tRNA ligase.
      
 0.588
ENSAPLP00000023897
Uncharacterized protein.
    
 0.585
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.