STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IML7_ANAPPUncharacterized protein. (1549 aa)    
Predicted Functional Partners:
U3I418_ANAPP
ABC transporter domain-containing protein.
   
0.847
GOLPH3L
Golgi phosphoprotein 3 like.
    
 
 0.569
APOB
Apolipoprotein B.
   
 
 0.523
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.498
ANKRD9
Ankyrin repeat domain 9.
   
 0.489
SLC46A1
Solute carrier family 46 member 1.
   
  
 0.476
USP10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.470
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.461
GOLPH3
Golgi phosphoprotein 3.
    
 
 0.457
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.449
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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