STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN1Matrilin 1. (524 aa)    
Predicted Functional Partners:
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
     
 0.727
ACAN
Aggrecan.
   
 0.693
COMP
Uncharacterized protein.
   
 0.647
U3IAT1_ANAPP
Fibrillar collagen NC1 domain-containing protein.
   
 0.583
COL3A1
Uncharacterized protein.
   
 0.555
COL1A1
Collagen type I alpha 1 chain.
   
 0.555
LUM
Lumican.
   
 0.539
CHAD
Uncharacterized protein.
   
 0.481
CRISP3
Cysteine rich secretory protein 3; Belongs to the CRISP family.
   
  
 0.455
ENSAPLP00000024021
Uncharacterized protein.
 
 
  0.450
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.