STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN1Matrilin 1. (524 aa)    
Predicted Functional Partners:
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
     
 0.723
LUM
Lumican.
   
 0.553
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
   
 0.541
ENSAPLP00000020204
Uncharacterized protein.
   
 0.541
ACAN
Aggrecan.
   
 0.464
ENSAPLP00000024021
Uncharacterized protein.
 
 
 0.462
TGFB3
Transforming growth factor beta 3.
   
 0.459
CRISP3
Cysteine rich secretory protein 3; Belongs to the CRISP family.
   
  
 0.451
COL6A1
VWFA domain-containing protein.
 
 
 0.438
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.423
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.