STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCG1ATP binding cassette subfamily G member 1. (666 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
0.809
NR1H3
Nuclear receptor subfamily 1 group H member 3.
   
 0.727
NPC1
NPC intracellular cholesterol transporter 1.
   
 
 0.569
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.487
CPT1A
Carnitine palmitoyltransferase 1A; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.485
ABCD4
ATP binding cassette subfamily D member 4.
   
  
 0.480
IRS2
Insulin receptor substrate 2.
    
 0.466
ATP5F1C
ATP synthase subunit gamma.
   
   0.462
SIRT6
Sirtuin 6.
   
  
 0.455
NLRX1
NLR family member X1.
 
      0.451
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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