Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (200 aa)    
Predicted Functional Partners:
CYTL1
Cytokine like 1.
      
 0.739
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.667
MRPS31
Mitochondrial ribosomal protein S31.
      
 0.657
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.633
U3IRQ9_ANAPP
Glyco_tran_28_C domain-containing protein.
      
 0.573
YIPF6
Protein YIPF.
      
 0.572
EFHC2
EF-hand domain containing 2.
   
  
 0.563
PROSER1
Proline and serine rich 1.
      
 0.557
WDR44
WD repeat domain 44.
      
 0.553
NHLRC3
NHL repeat containing 3.
      
 0.553
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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