STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11. (285 aa)    
Predicted Functional Partners:
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
 
    
 0.689
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.644
HELZ2
Helicase with zinc finger 2.
   
 0.639
RCBTB1
RCC1 and BTB domain containing protein 1.
     
 0.637
TRAFD1
TRAF-type zinc finger domain containing 1.
   
 0.636
ENSAPLP00000019203
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.622
CHMP5
Charged multivesicular body protein 5.
      
 0.611
NUBPL
Nucleotide binding protein like.
      
 0.611
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.611
FBXO44
Uncharacterized protein.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.