Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPOTranslocator protein. (166 aa)    
Predicted Functional Partners:
TSPO2
Translocator protein 2.
  
  
0.904
TSPOAP1
Uncharacterized protein.
    
 0.767
RIMBP2
RIMS binding protein 2.
    
 0.767
CREB3L1
Uncharacterized protein.
    
 
 0.712
CLDN11
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.654
PCSK9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
      
 0.651
LIPG
Lipase G, endothelial type.
      
 0.651
APOB
Apolipoprotein B.
      
 0.637
VDAC1
Voltage dependent anion channel 1.
   
 
 0.634
TMEM119
Transmembrane protein 119.
      
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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