STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTPAPMitochondrial poly(A) polymerase. (548 aa)    
Predicted Functional Partners:
NMNAT2
Nicotinamide nucleotide adenylyltransferase 2.
 
      0.632
TENT4B
Terminal nucleotidyltransferase 4B.
      
 0.611
SUPV3L1
Suv3 like RNA helicase.
   
  
 0.506
CALCOCO2
Uncharacterized protein.
    
 
 0.503
PAPOLG
Poly(A) polymerase gamma.
   
  
 0.502
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
  
 0.500
SLIRP
SRA stem-loop interacting RNA binding protein.
    
 0.490
BICC1
BicC family RNA binding protein 1.
   
 
 0.433
GRSF1
G-rich RNA sequence binding factor 1.
    
 0.420
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.417
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.