Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYEF2Myelin expression factor 2. (629 aa)    
Predicted Functional Partners:
CTXN2
Cortexin 2.
    
 
 0.769
POLR2K
RNA polymerase II subunit K.
   
 0.711
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.680
SLC24A5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.633
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
    
 
 0.624
SOX1
SRY-box transcription factor 1.
    
 
 0.593
TTLL12
Tubulin tyrosine ligase like 12.
      
 0.588
GRTP1
Growth hormone regulated TBC protein 1.
      
 0.588
BTF3
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 
 0.567
TRPV6
Transient receptor potential cation channel subfamily V member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.567
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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