STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRPPRCUncharacterized protein. (857 aa)    
Predicted Functional Partners:
ENSAPLP00000020702
Uncharacterized protein.
 
      0.900
SLIRP
SRA stem-loop interacting RNA binding protein.
   
 
 0.765
FASTKD3
FAST kinase domains 3.
    
 
 0.614
C12orf65
Chromosome 12 open reading frame 65.
      
 0.609
ENSAPLP00000021308
Uncharacterized protein.
   
  
 0.602
ALPK3
Alpha kinase 3.
      
 0.591
ENSAPLP00000028926
Uncharacterized protein.
    
 
 0.573
U3IGX5_ANAPP
PPR_long domain-containing protein.
      
 0.523
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
      
 0.523
TTC19
Tetratricopeptide repeat domain 19.
      
 0.519
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.