Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRPPRCUncharacterized protein. (857 aa)    
Predicted Functional Partners:
SLIRP
SRA stem-loop interacting RNA binding protein.
   
 0.962
ENSAPLP00000020702
Uncharacterized protein.
 
      0.900
PTCD3
Pentatricopeptide repeat domain 3.
   
 
 0.704
VDAC1
Voltage dependent anion channel 1.
   
 
 0.701
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.686
U3IF54_ANAPP
RF_PROK_I domain-containing protein.
    
 
 0.649
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.619
MRPL45
Mitochondrial ribosomal protein L45.
    
 
 0.610
MRPS31
Mitochondrial ribosomal protein S31.
    
 
 0.610
NDUFA10
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.585
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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