STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC8Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
 0.971
BBS2
Bardet-Biedl syndrome 2.
  
 0.965
ENSAPLP00000019065
TPR_REGION domain-containing protein.
 
  
  0.959
ENSAPLP00000026428
Uncharacterized protein.
 
  
  0.958
BBS9
PHTB1_N domain-containing protein.
  
 
 0.928
BBS4
Bardet-Biedl syndrome 4.
   
 0.928
ENSAPLP00000032116
PHTB1_C domain-containing protein.
    
 0.901
KLHL41
Kelch like family member 41.
   
 0.897
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.834
KIF25
Kinesin family member 25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.750
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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