Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WBP4WW domain binding protein 4. (388 aa)    
Predicted Functional Partners:
ZMAT2
Zinc finger matrin-type 2.
   
 0.958
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.920
MFAP1
Microfibril associated protein 1.
   
 0.919
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.911
PRPF6
Pre-mRNA processing factor 6.
   
 0.908
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.903
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.895
PRPF38A
Pre-mRNA processing factor 38A.
   
 
 0.835
UBL5
Ubiquitin like 5.
    
 0.834
PRPF8
Pre-mRNA processing factor 8.
    
  0.833
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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