Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VAT1LVesicle amine transport 1 like. (418 aa)    
Predicted Functional Partners:
ENSAPLP00000018986
PKS_AT domain-containing protein.
 
 0.940
CLEC3A
C-type lectin domain family 3 member A.
 
  
 
 0.652
MMRN2
Multimerin 2.
    
 
 0.639
NVL
Nuclear VCP like.
    
 
 0.620
FGD5
FYVE, RhoGEF and PH domain containing 5.
      
 0.617
KANK1
KN motif and ankyrin repeat domains 1.
   
 
 0.609
KANK3
ANK_REP_REGION domain-containing protein.
   
 
 0.609
SDR42E1
Short chain dehydrogenase/reductase family 42E, member 1; Belongs to the 3-beta-HSD family.
  
  
 0.603
DHRS7
Dehydrogenase/reductase 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.585
TDRD15
Tudor domain containing 15.
    
 
 0.579
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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