STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM23Tripartite motif containing 23. (582 aa)    
Predicted Functional Partners:
ENSAPLP00000016785
Thioredoxin domain-containing protein.
   
 0.827
ENSAPLP00000018304
NDK domain-containing protein.
   
 0.827
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
      
 0.769
ENSAPLP00000017065
ANK_REP_REGION domain-containing protein.
    
 0.644
GAK
Cyclin G associated kinase.
   
 0.642
TRIM42
Tripartite motif containing 42.
    
 0.632
UBE2D2
Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.626
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.626
ENSAPLP00000029377
Uncharacterized protein.
   
 0.621
UBE2E2
Ubiquitin conjugating enzyme E2 E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.615
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.