Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLK3Protein kinase domain-containing protein. (272 aa)    
Predicted Functional Partners:
ENSAPLP00000026495
Uncharacterized protein.
 
      0.711
BCLAF1
BCL2 associated transcription factor 1.
    
 
 0.512
RSRP1
Arginine and serine rich protein 1.
   
 
 0.510
SRSF1
Uncharacterized protein.
    
 
 0.489
TRA2A
Transformer 2 alpha homolog.
   
 
 0.462
SRSF10
Serine and arginine rich splicing factor 10.
   
 
 0.446
SRSF2
RRM domain-containing protein.
   
 
 0.445
SRPK1
SRSF protein kinase 1.
   
 
 0.436
SRPK2
SRSF protein kinase 2.
   
 
 0.436
TRA2B
RRM domain-containing protein.
   
 
 0.423
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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