Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABCC6ATP binding cassette subfamily C member 6. (1381 aa)    
Predicted Functional Partners:
U3I418_ANAPP
ABC transporter domain-containing protein.
   
 0.642
PDGFD
Platelet derived growth factor D.
      
 0.584
CEBPB
CCAAT/enhancer-binding protein.
   
 
 0.558
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.519
U3IRM5_ANAPP
Uncharacterized protein.
      
 0.507
ABCG8
ATP binding cassette subfamily G member 8.
   
 0.477
SERPINF2
SERPIN domain-containing protein; Belongs to the serpin family.
   
  
 0.471
PDZK1
PDZ domain containing 1.
    
 0.465
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
  0.456
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.452
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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