Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF11Kruppel like factor 11. (626 aa)    
Predicted Functional Partners:
SIN3B
SIN3 transcription regulator family member B.
    
 0.747
SIN3A
SIN3 transcription regulator family member A.
    
 0.747
BLK
Tyrosine-protein kinase.
    
 0.613
PAX4
Paired box 4.
    
 0.611
SP1
Sp1 transcription factor.
 
  
 0.542
SOX6
SRY-box transcription factor 6.
    
 
 0.539
HNF1A
Homeobox domain-containing protein.
    
 
 0.532
LMO2
LIM domain only 2.
   
 0.474
U3J5I9_ANAPP
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.463
PEX6
Peroxisomal biogenesis factor 6; Belongs to the AAA ATPase family.
    
 
 0.460
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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