STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A4Solute carrier family 22 member 4. (644 aa)    
Predicted Functional Partners:
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.534
BLK
Tyrosine-protein kinase.
    
 
 0.510
SLC16A9
Solute carrier family 16 member 9.
    
 
 0.505
SLCO3A1
Solute carrier organic anion transporter family member.
   
  
 0.487
INTS1
Integrator complex subunit 1.
    
 0.479
INTS9
Integrator complex subunit 9.
    
 0.468
INTS11
Integrator complex subunit 11.
    
 0.466
PDZK1
PDZ domain containing 1.
   
 
 0.441
INTS13
Integrator complex subunit 13.
    
 0.440
ENSAPLP00000027063
Osteocalcin; Binds strongly to apatite and calcium.
   
 0.440
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.