C2CD2L protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2CD2L

C2CD2 like. (268 aa)

Predicted Functional Partners:

TMCO4

0.868

MACO1

0.670

TRARG1

0.642

ENSAPLP00000029457

0.580

SRPRB

0.579

SEC22B

0.570

SRPRA

0.530

SARAF

0.483

SRP14

0.459

DDOST

0.443

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2CD2L	DDOST	ENSAPLP00000008856	ENSAPLP00000006600	C2CD2 like.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	0.443
C2CD2L	ENSAPLP00000029457	ENSAPLP00000008856	ENSAPLP00000029457	C2CD2 like.	PPM-type phosphatase domain-containing protein.	0.580
C2CD2L	MACO1	ENSAPLP00000008856	ENSAPLP00000016211	C2CD2 like.	Macoilin 1.	0.670
C2CD2L	SARAF	ENSAPLP00000008856	ENSAPLP00000018490	C2CD2 like.	Store-operated calcium entry associated regulatory factor.	0.483
C2CD2L	SEC22B	ENSAPLP00000008856	ENSAPLP00000015726	C2CD2 like.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.570
C2CD2L	SRP14	ENSAPLP00000008856	ENSAPLP00000026316	C2CD2 like.	Signal recognition particle 14.	0.459
C2CD2L	SRPRA	ENSAPLP00000008856	ENSAPLP00000015977	C2CD2 like.	SRP receptor subunit alpha.	0.530
C2CD2L	SRPRB	ENSAPLP00000008856	ENSAPLP00000025222	C2CD2 like.	Uncharacterized protein.	0.579
C2CD2L	TMCO4	ENSAPLP00000008856	ENSAPLP00000032223	C2CD2 like.	Transmembrane and coiled-coil domains 4.	0.868
C2CD2L	TRARG1	ENSAPLP00000008856	ENSAPLP00000023131	C2CD2 like.	Uncharacterized protein.	0.642
DDOST	C2CD2L	ENSAPLP00000006600	ENSAPLP00000008856	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	C2CD2 like.	0.443
DDOST	SRPRA	ENSAPLP00000006600	ENSAPLP00000015977	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	SRP receptor subunit alpha.	0.676
DDOST	SRPRB	ENSAPLP00000006600	ENSAPLP00000025222	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	Uncharacterized protein.	0.487
ENSAPLP00000029457	C2CD2L	ENSAPLP00000029457	ENSAPLP00000008856	PPM-type phosphatase domain-containing protein.	C2CD2 like.	0.580
ENSAPLP00000029457	MACO1	ENSAPLP00000029457	ENSAPLP00000016211	PPM-type phosphatase domain-containing protein.	Macoilin 1.	0.615
ENSAPLP00000029457	SRPRB	ENSAPLP00000029457	ENSAPLP00000025222	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.486
MACO1	C2CD2L	ENSAPLP00000016211	ENSAPLP00000008856	Macoilin 1.	C2CD2 like.	0.670
MACO1	ENSAPLP00000029457	ENSAPLP00000016211	ENSAPLP00000029457	Macoilin 1.	PPM-type phosphatase domain-containing protein.	0.615
MACO1	SRP14	ENSAPLP00000016211	ENSAPLP00000026316	Macoilin 1.	Signal recognition particle 14.	0.454
MACO1	SRPRB	ENSAPLP00000016211	ENSAPLP00000025222	Macoilin 1.	Uncharacterized protein.	0.571