STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAPTM5Lysosomal protein transmembrane 5. (258 aa)    
Predicted Functional Partners:
LAPTM4B
Lysosomal protein transmembrane 4 beta.
     
0.907
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
     
0.903
U3I185_ANAPP
Tetraspanin.
   
  
 0.676
NOL10
Nucleolar protein 10.
      
 0.636
SERINC2
Serine incorporator 2.
      
 0.633
RAB39A
RAB39A, member RAS oncogene family.
      
 0.610
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.524
U3IC10_ANAPP
Uncharacterized protein.
      
 0.459
ENSAPLP00000018165
Uncharacterized protein.
      
 0.459
ENSAPLP00000028489
CNNM transmembrane domain-containing protein.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.