Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN5Calpain 5; Belongs to the peptidase C2 family. (641 aa)    
Predicted Functional Partners:
CAPNS2
Calpain small subunit 2.
 
 
 0.906
SRFBP1
Serum response factor binding protein 1.
      
 0.704
ENSAPLP00000032537
Uncharacterized protein.
   
 0.650
OMP
Olfactory marker protein.
 
      0.563
MARCHF8
Membrane associated ring-CH-type finger 8.
   
  
 0.530
U3IA97_ANAPP
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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