STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTAR1Protein prenyltransferase alpha subunit repeat containing 1. (544 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.989
CHM
Uncharacterized protein.
   
 0.865
RAB26
RAB26, member RAS oncogene family.
    
 0.826
DMRT3
Doublesex and mab-3 related transcription factor 3.
      
 0.667
U3J047_ANAPP
Uncharacterized protein.
    
 0.648
FBXL2
F-box and leucine rich repeat protein 2.
    
 
 0.637
FBXL20
F-box and leucine rich repeat protein 20.
    
 
 0.637
RAB9B
RAB9B, member RAS oncogene family.
    
 0.634
RAB9A
RAB9A, member RAS oncogene family.
    
 0.634
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 
 0.614
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.