Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SNX13Sorting nexin 13. (1041 aa)    
Predicted Functional Partners:
TSPAN13
Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.872
SNX14
Sorting nexin 14.
   
 
 0.840
TSPAN2
Tetraspanin.
    
   0.736
ANKMY2
Ankyrin repeat and MYND domain containing 2.
     
 0.715
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.643
ANKRD46
Ankyrin repeat domain 46.
     
 0.602
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.598
GREB1L
GREB1 like retinoic acid receptor coactivator.
      
 0.584
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
      
 0.580
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.563
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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