STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX13Sorting nexin 13. (1041 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin 14.
   
 
0.645
BZW2
Basic leucine zipper and W2 domains 2.
      
 0.635
ANKMY2
Ankyrin repeat and MYND domain containing 2.
    
 
 0.614
CHMP5
Charged multivesicular body protein 5.
      
 0.610
ZNF622
Zinc finger protein 622.
      
 0.609
FERD3L
Fer3 like bHLH transcription factor.
      
 0.586
HNMT
Histamine N-methyltransferase.
      
 0.532
RPS6KC1
Ribosomal protein S6 kinase C1.
     
 0.479
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.459
ENSAPLP00000017238
PX domain-containing protein.
   
  
 0.458
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.