Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAP130SAP130_C domain-containing protein. (809 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.971
SINHCAF
SIN3-HDAC complex associated factor.
    
 0.971
ING2
Inhibitor of growth protein.
    
 0.964
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.937
SIN3B
SIN3 transcription regulator family member B.
   
 0.912
SIN3A
SIN3 transcription regulator family member A.
   
 0.912
SAP30L
SAP30 like.
    
 0.855
SAP30
Sin3A associated protein 30.
    
 0.855
MXD1
MAX dimerization protein 1.
    
   0.817
ZNF704
Zinc finger protein 704.
    
   0.817
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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