STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC27CWC27 spliceosome associated cyclophilin. (462 aa)    
Predicted Functional Partners:
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.982
CDC5L
Cell division cycle 5 like.
   
 
 0.972
U3IYL3_ANAPP
Uncharacterized protein.
   
 0.969
PRPF19
Pre-mRNA processing factor 19.
    
 0.966
CDC40
Cell division cycle 40.
    
 0.944
SF3A3
Splicing factor 3a subunit 3.
   
 0.924
BUD31
BUD31 homolog.
    
 0.923
RBMX2
RNA binding motif protein X-linked 2.
   
 0.919
PRPF8
Pre-mRNA processing factor 8.
   
 0.916
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.915
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.