Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPECC1LCalponin-homology (CH) domain-containing protein. (1120 aa)    
Predicted Functional Partners:
ANLN
Anillin actin binding protein.
   
 
 0.587
CCBE1
Collagen and calcium binding EGF domains 1.
      
 0.475
U3IN17_ANAPP
Uncharacterized protein.
      
 0.473
MYO1A
Myosin IA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.439
U3I882_ANAPP
Protein kinase domain-containing protein.
      
 0.430
STK39
Serine/threonine kinase 39.
      
 0.430
SPICE1
Uncharacterized protein.
      
 0.413
SLC2A10
Solute carrier family 2 member 10; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.408
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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