STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P4HA1Prolyl 4-hydroxylase subunit alpha 1. (530 aa)    
Predicted Functional Partners:
P4HB
Protein disulfide-isomerase.
   
 0.937
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.753
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  
 0.630
SERPINH1
Serpin family H member 1; Belongs to the serpin family.
   
  
 0.609
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  
 0.596
CRTAP
Cartilage associated protein.
   
  
 0.588
COL3A1
Uncharacterized protein.
    
 0.585
COL1A1
Collagen type I alpha 1 chain.
    
 0.585
PDIA4
Protein disulfide-isomerase.
   
 0.560
LRGUK
Uncharacterized protein.
   
   0.559
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.